Merge pull request #68 from chazeon/fix-testing-newton-logit-reg #43
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| # modified version of: | |
| # https://gist.github.com/NickNaso/0d478f1481686d5bcc868cac06620a60 | |
| name: CI | |
| on: [push, pull_request, release] | |
| jobs: | |
| build: | |
| name: ${{ matrix.config.name }} | |
| runs-on: ${{ matrix.config.os }} | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| config: | |
| - { | |
| name: "ubuntu_latest_gcc_arma", | |
| os: ubuntu-latest, | |
| build_type: "Release", | |
| cc: "gcc", | |
| cxx: "g++", | |
| fc: "gfortran", | |
| linalg: "arma" | |
| } | |
| - { | |
| name: "ubuntu_latest_gcc_eigen", | |
| os: ubuntu-latest, | |
| build_type: "Release", | |
| cc: "gcc", | |
| cxx: "g++", | |
| fc: "gfortran", | |
| linalg: "eigen" | |
| } | |
| - { | |
| name: "ubuntu_latest_gcc9_arma", | |
| os: ubuntu-latest, | |
| build_type: "Release", | |
| cc: "gcc-9", | |
| cxx: "g++-9", | |
| fc: "gfortran-9", | |
| linalg: "arma" | |
| } | |
| - { | |
| name: "ubuntu_latest_gcc9_eigen", | |
| os: ubuntu-latest, | |
| build_type: "Release", | |
| cc: "gcc-9", | |
| cxx: "g++-9", | |
| fc: "gfortran-9", | |
| linalg: "eigen" | |
| } | |
| - { | |
| name: "macos_latest_clang_arma", | |
| os: macos-latest, | |
| build_type: "Release", | |
| cc: "clang", | |
| cxx: "clang++", | |
| linalg: "arma" | |
| } | |
| - { | |
| name: "macos_latest_clang_eigen", | |
| os: macos-latest, | |
| build_type: "Release", | |
| cc: "clang", | |
| cxx: "clang++", | |
| linalg: "eigen" | |
| } | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Print env | |
| run: | | |
| echo github.event.action: ${{ github.event.action }} | |
| echo github.event_name: ${{ github.event_name }} | |
| - name: Install dependencies on ubuntu | |
| if: startsWith(matrix.config.name, 'ubuntu') | |
| run: | | |
| sudo apt-get update | |
| sudo apt-get install ${{ matrix.config.cc }} ${{ matrix.config.cxx }} ${{ matrix.config.fc }} libblas-dev liblapack-dev | |
| ${{ matrix.config.cc }} --version | |
| - name: Configure | |
| shell: bash | |
| run: | | |
| export CC=${{ matrix.config.cc }} | |
| export CXX=${{ matrix.config.cxx }} | |
| export FC=${{ matrix.config.fc }} | |
| WDIR=${PWD} | |
| if [[ "${{ matrix.config.linalg }}" == "arma" ]]; then | |
| export OPTIM_TEST_USE_ARMA="y" | |
| mkdir ${WDIR}/arma_tmp | |
| git clone --single-branch https://gitlab.com/conradsnicta/armadillo-code.git ${WDIR}/arma_tmp > /dev/null 2>&1 | |
| mv ${WDIR}/arma_tmp/include/* ${WDIR}/include | |
| rm -rf ${WDIR}/arma_tmp | |
| export ARMA_INCLUDE_PATH="${WDIR}/include" | |
| elif [[ "${{ matrix.config.linalg }}" == "eigen" ]]; then | |
| export OPTIM_TEST_USE_EIGEN="y" | |
| mkdir ${WDIR}/eigen_tmp | |
| git clone --single-branch https://gitlab.com/libeigen/eigen.git ${WDIR}/eigen_tmp > /dev/null 2>&1 | |
| mv ${WDIR}/eigen_tmp/* ${WDIR}/include | |
| rm -rf ${WDIR}/eigen_tmp | |
| export EIGEN_INCLUDE_PATH="${WDIR}/include" | |
| else | |
| echo -e " \x1B[31m- error: unrecognized linear algebra library.\033[0m" >&2 ; | |
| echo "" | |
| exit 1 | |
| fi | |
| # | |
| git submodule update --init | |
| ./configure -c -l ${{ matrix.config.linalg }} | |
| - name: Build | |
| shell: bash | |
| run: make | |
| - name: Tests | |
| shell: bash | |
| working-directory: tests | |
| run: | | |
| WDIR=${PWD} | |
| export CXX=${{ matrix.config.cxx }} | |
| if [[ "${{ matrix.config.linalg }}" == "arma" ]]; then | |
| export OPTIM_TEST_USE_ARMA="y" | |
| elif [[ "${{ matrix.config.linalg }}" == "eigen" ]]; then | |
| export OPTIM_TEST_USE_EIGEN="y" | |
| export EIGEN_INCLUDE_PATH="${WDIR}/../include" | |
| else | |
| echo -e " \x1B[31m- error: unrecognized linear algebra library.\033[0m" >&2 ; | |
| echo "" | |
| exit 1 | |
| fi | |
| ./setup && ./test_setup/run_cov |